Cluster: HRGMv2_2866_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_109 | HRGMv2_2866_109_2 | 1273 | 2256 | - | GH113 |
| pfam | HRGMv2_2866_109 | HRGMv2_2866_109_3 | 2275 | 2763 | - | tRNA_edit |
| CAZyme | HRGMv2_2866_109 | HRGMv2_2866_109_4 | 3051 | 5405 | + | GT35 |
| pfam | HRGMv2_2866_109 | HRGMv2_2866_109_5 | 5606 | 6871 | + | MFS_3 | MFS_1 |
| TC | HRGMv2_2866_109 | HRGMv2_2866_109_6 | 6979 | 9024 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2866_109_2
Type: CAZyme
Location: 1273 - 2256 (-)
Type: CAZyme
Location: 1273 - 2256 (-)
Gene ID: HRGMv2_2866_109_3
Type: pfam
Location: 2275 - 2763 (-)
Type: pfam
Location: 2275 - 2763 (-)
Gene ID: HRGMv2_2866_109_4
Type: CAZyme
Location: 3051 - 5405 (+)
Type: CAZyme
Location: 3051 - 5405 (+)
Gene ID: HRGMv2_2866_109_5
Type: pfam
Location: 5606 - 6871 (+)
Type: pfam
Location: 5606 - 6871 (+)
Gene ID: HRGMv2_2866_109_6
Type: TC
Location: 6979 - 9024 (-)
Type: TC
Location: 6979 - 9024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.