dbCAN Logo

Cluster: HRGMv2_2866_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2866_84 HRGMv2_2866_84_2 679 2664 - GH31_1
NULL(UNKNOWN) HRGMv2_2866_84 HRGMv2_2866_84_3 2794 2913 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2866_84 HRGMv2_2866_84_4 3096 4061 - PfkB
CAZyme HRGMv2_2866_84 HRGMv2_2866_84_5 4063 6252 - GH36
CAZyme HRGMv2_2866_84 HRGMv2_2866_84_6 6256 7668 - GH13_18
TC HRGMv2_2866_84 HRGMv2_2866_84_7 7743 8654 - 3.A.1.1.28
TC HRGMv2_2866_84 HRGMv2_2866_84_8 8651 9532 - 3.A.1.1.28
TC HRGMv2_2866_84 HRGMv2_2866_84_9 9529 10818 - 3.A.1.1.28
Gene ID: HRGMv2_2866_84_2
Type: CAZyme
Location: 679 - 2664 (-)
Gene ID: HRGMv2_2866_84_3
Type:
Location: 2794 - 2913 (+)
Gene ID: HRGMv2_2866_84_4
Type: STP
Location: 3096 - 4061 (-)
Gene ID: HRGMv2_2866_84_5
Type: CAZyme
Location: 4063 - 6252 (-)
Gene ID: HRGMv2_2866_84_6
Type: CAZyme
Location: 6256 - 7668 (-)
Gene ID: HRGMv2_2866_84_7
Type: TC
Location: 7743 - 8654 (-)
Gene ID: HRGMv2_2866_84_8
Type: TC
Location: 8651 - 9532 (-)
Gene ID: HRGMv2_2866_84_9
Type: TC
Location: 9529 - 10818 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2866_84_2 vegan > omnivore 1.43874 0.03783

🧭 Explore Read Mapping of CGC

← Back to Cluster List