Cluster: HRGMv2_2866_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_10202
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_7 | HRGMv2_2866_7_22 | 26005 | 28701 | - | 3.A.3.2.22 |
| pfam | HRGMv2_2866_7 | HRGMv2_2866_7_23 | 28891 | 29469 | - | TerD |
| pfam | HRGMv2_2866_7 | HRGMv2_2866_7_24 | 29685 | 30236 | - | Rubrerythrin | RUBY_RBDX |
| CAZyme | HRGMv2_2866_7 | HRGMv2_2866_7_25 | 30340 | 31188 | - | CE4 |
| TC | HRGMv2_2866_7 | HRGMv2_2866_7_26 | 31436 | 32701 | + | 9.B.34.1.3 |
Gene ID: HRGMv2_2866_7_22
Type: TC
Location: 26005 - 28701 (-)
Type: TC
Location: 26005 - 28701 (-)
Gene ID: HRGMv2_2866_7_23
Type: pfam
Location: 28891 - 29469 (-)
Type: pfam
Location: 28891 - 29469 (-)
Gene ID: HRGMv2_2866_7_24
Type: pfam
Location: 29685 - 30236 (-)
Type: pfam
Location: 29685 - 30236 (-)
Gene ID: HRGMv2_2866_7_25
Type: CAZyme
Location: 30340 - 31188 (-)
Type: CAZyme
Location: 30340 - 31188 (-)
Gene ID: HRGMv2_2866_7_26
Type: TC
Location: 31436 - 32701 (+)
Type: TC
Location: 31436 - 32701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.