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Cluster: HRGMv2_2866_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2866_67 HRGMv2_2866_67_7 7795 9054 + CE17
TC HRGMv2_2866_67 HRGMv2_2866_67_8 9118 9735 - 2.A.115.2.14
TC HRGMv2_2866_67 HRGMv2_2866_67_9 9757 10467 - 3.A.1.4.10
TC HRGMv2_2866_67 HRGMv2_2866_67_10 10480 11277 - 3.A.1.4.10
TC HRGMv2_2866_67 HRGMv2_2866_67_11 11274 12341 - 3.A.1.4.8
TC HRGMv2_2866_67 HRGMv2_2866_67_12 12355 13236 - 3.A.1.4.10
TC HRGMv2_2866_67 HRGMv2_2866_67_13 13421 14650 - 3.A.1.4.10
Gene ID: HRGMv2_2866_67_7
Type: CAZyme
Location: 7795 - 9054 (+)
Gene ID: HRGMv2_2866_67_8
Type: TC
Location: 9118 - 9735 (-)
Gene ID: HRGMv2_2866_67_9
Type: TC
Location: 9757 - 10467 (-)
Gene ID: HRGMv2_2866_67_10
Type: TC
Location: 10480 - 11277 (-)
Gene ID: HRGMv2_2866_67_11
Type: TC
Location: 11274 - 12341 (-)
Gene ID: HRGMv2_2866_67_12
Type: TC
Location: 12355 - 13236 (-)
Gene ID: HRGMv2_2866_67_13
Type: TC
Location: 13421 - 14650 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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