Cluster: HRGMv2_2866_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_48 | HRGMv2_2866_48_3 | 2274 | 3128 | + | 9.B.143.3.6 |
| pfam | HRGMv2_2866_48 | HRGMv2_2866_48_4 | 3139 | 3459 | + | TfoX_N |
| pfam | HRGMv2_2866_48 | HRGMv2_2866_48_5 | 3505 | 4068 | - | PAP2 |
| CAZyme | HRGMv2_2866_48 | HRGMv2_2866_48_6 | 4068 | 5120 | - | CE2 |
| CAZyme | HRGMv2_2866_48 | HRGMv2_2866_48_7 | 5321 | 6925 | + | GH9 |
| pfam | HRGMv2_2866_48 | HRGMv2_2866_48_8 | 7024 | 7677 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | HRGMv2_2866_48 | HRGMv2_2866_48_9 | 7751 | 10021 | - | GH36 |
Gene ID: HRGMv2_2866_48_3
Type: TC
Location: 2274 - 3128 (+)
Type: TC
Location: 2274 - 3128 (+)
Gene ID: HRGMv2_2866_48_4
Type: pfam
Location: 3139 - 3459 (+)
Type: pfam
Location: 3139 - 3459 (+)
Gene ID: HRGMv2_2866_48_5
Type: pfam
Location: 3505 - 4068 (-)
Type: pfam
Location: 3505 - 4068 (-)
Gene ID: HRGMv2_2866_48_6
Type: CAZyme
Location: 4068 - 5120 (-)
Type: CAZyme
Location: 4068 - 5120 (-)
Gene ID: HRGMv2_2866_48_7
Type: CAZyme
Location: 5321 - 6925 (+)
Type: CAZyme
Location: 5321 - 6925 (+)
Gene ID: HRGMv2_2866_48_8
Type: pfam
Location: 7024 - 7677 (-)
Type: pfam
Location: 7024 - 7677 (-)
Gene ID: HRGMv2_2866_48_9
Type: CAZyme
Location: 7751 - 10021 (-)
Type: CAZyme
Location: 7751 - 10021 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.