Cluster: HRGMv2_2866_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_47 | HRGMv2_2866_47_17 | 15880 | 17661 | - | GH13_9 |
| TF | HRGMv2_2866_47 | HRGMv2_2866_47_18 | 17675 | 18118 | - | MarR |
| pfam | HRGMv2_2866_47 | HRGMv2_2866_47_19 | 18375 | 18758 | + | OAD_gamma |
| TC | HRGMv2_2866_47 | HRGMv2_2866_47_20 | 18777 | 19976 | + | 3.B.1.1.3 |
Gene ID: HRGMv2_2866_47_17
Type: CAZyme
Location: 15880 - 17661 (-)
Type: CAZyme
Location: 15880 - 17661 (-)
Gene ID: HRGMv2_2866_47_18
Type: TF
Location: 17675 - 18118 (-)
Type: TF
Location: 17675 - 18118 (-)
Gene ID: HRGMv2_2866_47_19
Type: pfam
Location: 18375 - 18758 (+)
Type: pfam
Location: 18375 - 18758 (+)
Gene ID: HRGMv2_2866_47_20
Type: TC
Location: 18777 - 19976 (+)
Type: TC
Location: 18777 - 19976 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.