Cluster: HRGMv2_2866_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_00009
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_30 | HRGMv2_2866_30_13 | 12338 | 14719 | + | GT2 | GT2 |
| pfam | HRGMv2_2866_30 | HRGMv2_2866_30_14 | 14767 | 16407 | + | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | HRGMv2_2866_30 | HRGMv2_2866_30_15 | 16445 | 20641 | + | GT2 | GT2 |
| TC | HRGMv2_2866_30 | HRGMv2_2866_30_16 | 20830 | 22227 | + | 3.A.1.104.1 |
| TC | HRGMv2_2866_30 | HRGMv2_2866_30_17 | 22241 | 23491 | + | 3.A.1.103.6 |
Gene ID: HRGMv2_2866_30_13
Type: CAZyme
Location: 12338 - 14719 (+)
Type: CAZyme
Location: 12338 - 14719 (+)
Gene ID: HRGMv2_2866_30_14
Type: pfam
Location: 14767 - 16407 (+)
Type: pfam
Location: 14767 - 16407 (+)
Gene ID: HRGMv2_2866_30_15
Type: CAZyme
Location: 16445 - 20641 (+)
Type: CAZyme
Location: 16445 - 20641 (+)
Gene ID: HRGMv2_2866_30_16
Type: TC
Location: 20830 - 22227 (+)
Type: TC
Location: 20830 - 22227 (+)
Gene ID: HRGMv2_2866_30_17
Type: TC
Location: 22241 - 23491 (+)
Type: TC
Location: 22241 - 23491 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.