Cluster: HRGMv2_2866_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_00587
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_5 | HRGMv2_2866_5_31 | 32282 | 32626 | - | 2.A.7.33.5 |
| pfam | HRGMv2_2866_5 | HRGMv2_2866_5_32 | 32623 | 32979 | - | EamA |
| CAZyme | HRGMv2_2866_5 | HRGMv2_2866_5_33 | 32972 | 33922 | - | GT2 |
| pfam | HRGMv2_2866_5 | HRGMv2_2866_5_34 | 33939 | 34595 | - | Hexapep_2 |
| pfam | HRGMv2_2866_5 | HRGMv2_2866_5_35 | 34614 | 35807 | - | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4 |
| CAZyme | HRGMv2_2866_5 | HRGMv2_2866_5_36 | 35856 | 36641 | - | GT2 |
Gene ID: HRGMv2_2866_5_31
Type: TC
Location: 32282 - 32626 (-)
Type: TC
Location: 32282 - 32626 (-)
Gene ID: HRGMv2_2866_5_32
Type: pfam
Location: 32623 - 32979 (-)
Type: pfam
Location: 32623 - 32979 (-)
Gene ID: HRGMv2_2866_5_33
Type: CAZyme
Location: 32972 - 33922 (-)
Type: CAZyme
Location: 32972 - 33922 (-)
Gene ID: HRGMv2_2866_5_34
Type: pfam
Location: 33939 - 34595 (-)
Type: pfam
Location: 33939 - 34595 (-)
Gene ID: HRGMv2_2866_5_35
Type: pfam
Location: 34614 - 35807 (-)
Type: pfam
Location: 34614 - 35807 (-)
Gene ID: HRGMv2_2866_5_36
Type: CAZyme
Location: 35856 - 36641 (-)
Type: CAZyme
Location: 35856 - 36641 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.