Cluster: HRGMv2_2866_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_27 | HRGMv2_2866_27_11 | 12151 | 14859 | + | GH59 |
| TC | HRGMv2_2866_27 | HRGMv2_2866_27_12 | 14861 | 16201 | + | 2.A.66.1.33 |
| TF | HRGMv2_2866_27 | HRGMv2_2866_27_13 | 16365 | 17390 | + | 0042546 |
| NULL(UNKNOWN) | HRGMv2_2866_27 | HRGMv2_2866_27_14 | 17408 | 18340 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2866_27 | HRGMv2_2866_27_15 | 18405 | 19829 | - | 2.A.25.1.4 |
| TC | HRGMv2_2866_27 | HRGMv2_2866_27_16 | 20001 | 21017 | + | 9.A.11.1.1 |
| TC | HRGMv2_2866_27 | HRGMv2_2866_27_17 | 21034 | 21387 | + | 9.A.11.1.1 |
Gene ID: HRGMv2_2866_27_11
Type: CAZyme
Location: 12151 - 14859 (+)
Type: CAZyme
Location: 12151 - 14859 (+)
Gene ID: HRGMv2_2866_27_12
Type: TC
Location: 14861 - 16201 (+)
Type: TC
Location: 14861 - 16201 (+)
Gene ID: HRGMv2_2866_27_13
Type: TF
Location: 16365 - 17390 (+)
Type: TF
Location: 16365 - 17390 (+)
Gene ID: HRGMv2_2866_27_14
Type:
Location: 17408 - 18340 (+)
Type:
Location: 17408 - 18340 (+)
Gene ID: HRGMv2_2866_27_15
Type: TC
Location: 18405 - 19829 (-)
Type: TC
Location: 18405 - 19829 (-)
Gene ID: HRGMv2_2866_27_16
Type: TC
Location: 20001 - 21017 (+)
Type: TC
Location: 20001 - 21017 (+)
Gene ID: HRGMv2_2866_27_17
Type: TC
Location: 21034 - 21387 (+)
Type: TC
Location: 21034 - 21387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.