Cluster: HRGMv2_2866_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_22 | HRGMv2_2866_22_9 | 11103 | 13718 | - | 3.A.9.1.2 |
| pfam | HRGMv2_2866_22 | HRGMv2_2866_22_10 | 13860 | 14330 | + | SmpB |
| CAZyme | HRGMv2_2866_22 | HRGMv2_2866_22_11 | 14926 | 16314 | - | CE4 |
| pfam | HRGMv2_2866_22 | HRGMv2_2866_22_12 | 16336 | 18045 | - | EpsG |
| NULL(UNKNOWN) | HRGMv2_2866_22 | HRGMv2_2866_22_13 | 18276 | 19724 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2866_22 | HRGMv2_2866_22_14 | 19935 | 22676 | + | GH3 |
Gene ID: HRGMv2_2866_22_9
Type: TC
Location: 11103 - 13718 (-)
Type: TC
Location: 11103 - 13718 (-)
Gene ID: HRGMv2_2866_22_10
Type: pfam
Location: 13860 - 14330 (+)
Type: pfam
Location: 13860 - 14330 (+)
Gene ID: HRGMv2_2866_22_11
Type: CAZyme
Location: 14926 - 16314 (-)
Type: CAZyme
Location: 14926 - 16314 (-)
Gene ID: HRGMv2_2866_22_12
Type: pfam
Location: 16336 - 18045 (-)
Type: pfam
Location: 16336 - 18045 (-)
Gene ID: HRGMv2_2866_22_13
Type:
Location: 18276 - 19724 (+)
Type:
Location: 18276 - 19724 (+)
Gene ID: HRGMv2_2866_22_14
Type: CAZyme
Location: 19935 - 22676 (+)
Type: CAZyme
Location: 19935 - 22676 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.