Cluster: HRGMv2_2866_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_10200
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_22 | HRGMv2_2866_22_1 | 3 | 635 | + | 2.A.45.2.6 |
| CAZyme | HRGMv2_2866_22 | HRGMv2_2866_22_2 | 702 | 2783 | + | GH44 |
| TC | HRGMv2_2866_22 | HRGMv2_2866_22_3 | 2841 | 4475 | - | 2.A.53.3.9 |
| pfam | HRGMv2_2866_22 | HRGMv2_2866_22_4 | 4633 | 7770 | - | FtsX | FtsX |
| TC | HRGMv2_2866_22 | HRGMv2_2866_22_5 | 7782 | 8483 | - | 3.A.1.122.7 |
Gene ID: HRGMv2_2866_22_1
Type: TC
Location: 3 - 635 (+)
Type: TC
Location: 3 - 635 (+)
Gene ID: HRGMv2_2866_22_2
Type: CAZyme
Location: 702 - 2783 (+)
Type: CAZyme
Location: 702 - 2783 (+)
Gene ID: HRGMv2_2866_22_3
Type: TC
Location: 2841 - 4475 (-)
Type: TC
Location: 2841 - 4475 (-)
Gene ID: HRGMv2_2866_22_4
Type: pfam
Location: 4633 - 7770 (-)
Type: pfam
Location: 4633 - 7770 (-)
Gene ID: HRGMv2_2866_22_5
Type: TC
Location: 7782 - 8483 (-)
Type: TC
Location: 7782 - 8483 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.