Cluster: HRGMv2_2866_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_10199
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_20 | HRGMv2_2866_20_18 | 18153 | 19667 | - | GH5_4 |
| pfam | HRGMv2_2866_20 | HRGMv2_2866_20_19 | 19785 | 20234 | - | VanZ |
| CAZyme | HRGMv2_2866_20 | HRGMv2_2866_20_20 | 20231 | 22360 | - | GH3 |
| TC | HRGMv2_2866_20 | HRGMv2_2866_20_21 | 22699 | 23271 | + | 3.A.1.25.5 |
Gene ID: HRGMv2_2866_20_18
Type: CAZyme
Location: 18153 - 19667 (-)
Type: CAZyme
Location: 18153 - 19667 (-)
Gene ID: HRGMv2_2866_20_19
Type: pfam
Location: 19785 - 20234 (-)
Type: pfam
Location: 19785 - 20234 (-)
Gene ID: HRGMv2_2866_20_20
Type: CAZyme
Location: 20231 - 22360 (-)
Type: CAZyme
Location: 20231 - 22360 (-)
Gene ID: HRGMv2_2866_20_21
Type: TC
Location: 22699 - 23271 (+)
Type: TC
Location: 22699 - 23271 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.