Cluster: HRGMv2_2866_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_09578
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_19 | HRGMv2_2866_19_11 | 9243 | 11594 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_2866_19 | HRGMv2_2866_19_12 | 11737 | 13179 | + | GT5 |
| pfam | HRGMv2_2866_19 | HRGMv2_2866_19_13 | 13289 | 13903 | + | LRR_4 |
| TC | HRGMv2_2866_19 | HRGMv2_2866_19_14 | 13904 | 16561 | - | 3.A.3.2.21 |
Gene ID: HRGMv2_2866_19_11
Type: TC
Location: 9243 - 11594 (+)
Type: TC
Location: 9243 - 11594 (+)
Gene ID: HRGMv2_2866_19_12
Type: CAZyme
Location: 11737 - 13179 (+)
Type: CAZyme
Location: 11737 - 13179 (+)
Gene ID: HRGMv2_2866_19_13
Type: pfam
Location: 13289 - 13903 (+)
Type: pfam
Location: 13289 - 13903 (+)
Gene ID: HRGMv2_2866_19_14
Type: TC
Location: 13904 - 16561 (-)
Type: TC
Location: 13904 - 16561 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.