Cluster: HRGMv2_2866_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_07653
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2866_3 | HRGMv2_2866_3_26 | 27437 | 29134 | + | 8.A.59.4.1 |
| NULL(UNKNOWN) | HRGMv2_2866_3 | HRGMv2_2866_3_27 | 29311 | 30000 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2866_3 | HRGMv2_2866_3_28 | 30016 | 30768 | - | 0043669 |
| CAZyme | HRGMv2_2866_3 | HRGMv2_2866_3_29 | 30765 | 31949 | - | GH5_4 |
Gene ID: HRGMv2_2866_3_26
Type: TC
Location: 27437 - 29134 (+)
Type: TC
Location: 27437 - 29134 (+)
Gene ID: HRGMv2_2866_3_27
Type:
Location: 29311 - 30000 (-)
Type:
Location: 29311 - 30000 (-)
Gene ID: HRGMv2_2866_3_28
Type: TF
Location: 30016 - 30768 (-)
Type: TF
Location: 30016 - 30768 (-)
Gene ID: HRGMv2_2866_3_29
Type: CAZyme
Location: 30765 - 31949 (-)
Type: CAZyme
Location: 30765 - 31949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.