Cluster: HRGMv2_2863_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2863
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2863_4 | HRGMv2_2863_4_48 | 51245 | 53146 | - | GH13_31 |
| TF | HRGMv2_2863_4 | HRGMv2_2863_4_49 | 53380 | 54417 | + | 0043758 |
| pfam | HRGMv2_2863_4 | HRGMv2_2863_4_50 | 54410 | 54943 | + | GrpE |
| TC | HRGMv2_2863_4 | HRGMv2_2863_4_51 | 54989 | 56836 | + | 1.A.33.1.4 |
Gene ID: HRGMv2_2863_4_48
Type: CAZyme
Location: 51245 - 53146 (-)
Type: CAZyme
Location: 51245 - 53146 (-)
Gene ID: HRGMv2_2863_4_49
Type: TF
Location: 53380 - 54417 (+)
Type: TF
Location: 53380 - 54417 (+)
Gene ID: HRGMv2_2863_4_50
Type: pfam
Location: 54410 - 54943 (+)
Type: pfam
Location: 54410 - 54943 (+)
Gene ID: HRGMv2_2863_4_51
Type: TC
Location: 54989 - 56836 (+)
Type: TC
Location: 54989 - 56836 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.