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Cluster: HRGMv2_2863_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2863_2 HRGMv2_2863_2_72 67446 68759 - CE4
TC HRGMv2_2863_2 HRGMv2_2863_2_73 69009 70988 + 3.D.1.4.2
TC HRGMv2_2863_2 HRGMv2_2863_2_74 70988 71881 + 3.D.1.4.2
TC HRGMv2_2863_2 HRGMv2_2863_2_75 71882 72346 + 3.D.1.4.2
pfam HRGMv2_2863_2 HRGMv2_2863_2_76 72339 72725 + Complex1_30kDa
TC HRGMv2_2863_2 HRGMv2_2863_2_77 72718 73797 + 3.D.1.4.2
TC HRGMv2_2863_2 HRGMv2_2863_2_78 73811 74431 + 3.D.1.4.2
Gene ID: HRGMv2_2863_2_72
Type: CAZyme
Location: 67446 - 68759 (-)
Gene ID: HRGMv2_2863_2_73
Type: TC
Location: 69009 - 70988 (+)
Gene ID: HRGMv2_2863_2_74
Type: TC
Location: 70988 - 71881 (+)
Gene ID: HRGMv2_2863_2_75
Type: TC
Location: 71882 - 72346 (+)
Gene ID: HRGMv2_2863_2_76
Type: pfam
Location: 72339 - 72725 (+)
Gene ID: HRGMv2_2863_2_77
Type: TC
Location: 72718 - 73797 (+)
Gene ID: HRGMv2_2863_2_78
Type: TC
Location: 73811 - 74431 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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