Cluster: HRGMv2_2863_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2863
- CGC Family ID: CGCFAM_00076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2863_43 | HRGMv2_2863_43_1 | 381 | 2324 | + | 9.B.18.2.1 |
| pfam | HRGMv2_2863_43 | HRGMv2_2863_43_2 | 2342 | 3574 | + | DegT_DnrJ_EryC1 |
| TC | HRGMv2_2863_43 | HRGMv2_2863_43_3 | 3589 | 4215 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2863_43 | HRGMv2_2863_43_4 | 4208 | 4819 | + | Hexapep | PglD_N |
| CAZyme | HRGMv2_2863_43 | HRGMv2_2863_43_5 | 4816 | 5952 | + | GT4 |
| CAZyme | HRGMv2_2863_43 | HRGMv2_2863_43_6 | 5955 | 6761 | + | GT2 |
Gene ID: HRGMv2_2863_43_1
Type: TC
Location: 381 - 2324 (+)
Type: TC
Location: 381 - 2324 (+)
Gene ID: HRGMv2_2863_43_2
Type: pfam
Location: 2342 - 3574 (+)
Type: pfam
Location: 2342 - 3574 (+)
Gene ID: HRGMv2_2863_43_3
Type: TC
Location: 3589 - 4215 (+)
Type: TC
Location: 3589 - 4215 (+)
Gene ID: HRGMv2_2863_43_4
Type: pfam
Location: 4208 - 4819 (+)
Type: pfam
Location: 4208 - 4819 (+)
Gene ID: HRGMv2_2863_43_5
Type: CAZyme
Location: 4816 - 5952 (+)
Type: CAZyme
Location: 4816 - 5952 (+)
Gene ID: HRGMv2_2863_43_6
Type: CAZyme
Location: 5955 - 6761 (+)
Type: CAZyme
Location: 5955 - 6761 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.