Cluster: HRGMv2_2863_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2863
- CGC Family ID: CGCFAM_03501
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2863_32 | HRGMv2_2863_32_3 | 3389 | 4876 | + | GH51_1 |
| pfam | HRGMv2_2863_32 | HRGMv2_2863_32_4 | 4876 | 5130 | + | DUF6171 |
| pfam | HRGMv2_2863_32 | HRGMv2_2863_32_5 | 5146 | 5655 | + | dUTPase |
| TC | HRGMv2_2863_32 | HRGMv2_2863_32_6 | 5773 | 7164 | + | 2.A.38.1.1 |
| TC | HRGMv2_2863_32 | HRGMv2_2863_32_7 | 7177 | 8652 | + | 2.A.38.1.1 |
Gene ID: HRGMv2_2863_32_3
Type: CAZyme
Location: 3389 - 4876 (+)
Type: CAZyme
Location: 3389 - 4876 (+)
Gene ID: HRGMv2_2863_32_4
Type: pfam
Location: 4876 - 5130 (+)
Type: pfam
Location: 4876 - 5130 (+)
Gene ID: HRGMv2_2863_32_5
Type: pfam
Location: 5146 - 5655 (+)
Type: pfam
Location: 5146 - 5655 (+)
Gene ID: HRGMv2_2863_32_6
Type: TC
Location: 5773 - 7164 (+)
Type: TC
Location: 5773 - 7164 (+)
Gene ID: HRGMv2_2863_32_7
Type: TC
Location: 7177 - 8652 (+)
Type: TC
Location: 7177 - 8652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.