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Cluster: HRGMv2_2863_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2863_20 HRGMv2_2863_20_5 6503 7771 - 9.A.40.2.2
pfam HRGMv2_2863_20 HRGMv2_2863_20_6 7854 9278 - Radical_SAM
CAZyme HRGMv2_2863_20 HRGMv2_2863_20_7 9415 12474 - GH2
TC HRGMv2_2863_20 HRGMv2_2863_20_8 12522 13139 - 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_2863_20 HRGMv2_2863_20_9 13380 13976 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2863_20 HRGMv2_2863_20_10 14086 16902 + 3.A.5.1.3
pfam HRGMv2_2863_20 HRGMv2_2863_20_11 17133 18305 + Mbeg1-like
pfam HRGMv2_2863_20 HRGMv2_2863_20_12 18320 18874 + VanZ
TC HRGMv2_2863_20 HRGMv2_2863_20_13 18918 20264 + 2.A.2.3.3
CAZyme HRGMv2_2863_20 HRGMv2_2863_20_14 20267 22504 + GH2
Gene ID: HRGMv2_2863_20_5
Type: TC
Location: 6503 - 7771 (-)
Gene ID: HRGMv2_2863_20_6
Type: pfam
Location: 7854 - 9278 (-)
Gene ID: HRGMv2_2863_20_7
Type: CAZyme
Location: 9415 - 12474 (-)
Gene ID: HRGMv2_2863_20_8
Type: TC
Location: 12522 - 13139 (-)
Gene ID: HRGMv2_2863_20_9
Type:
Location: 13380 - 13976 (+)
Gene ID: HRGMv2_2863_20_10
Type: TC
Location: 14086 - 16902 (+)
Gene ID: HRGMv2_2863_20_11
Type: pfam
Location: 17133 - 18305 (+)
Gene ID: HRGMv2_2863_20_12
Type: pfam
Location: 18320 - 18874 (+)
Gene ID: HRGMv2_2863_20_13
Type: TC
Location: 18918 - 20264 (+)
Gene ID: HRGMv2_2863_20_14
Type: CAZyme
Location: 20267 - 22504 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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