Cluster: HRGMv2_2863_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2863
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2863_18 | HRGMv2_2863_18_1 | 162 | 2660 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2863_18 | HRGMv2_2863_18_2 | 2716 | 3060 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2863_18 | HRGMv2_2863_18_3 | 3496 | 4143 | - | 2.A.38.4.6 |
| TC | HRGMv2_2863_18 | HRGMv2_2863_18_4 | 4155 | 5492 | - | 2.A.38.4.1 |
| CAZyme | HRGMv2_2863_18 | HRGMv2_2863_18_5 | 5527 | 6861 | - | GH33 |
Gene ID: HRGMv2_2863_18_1
Type: CAZyme
Location: 162 - 2660 (+)
Type: CAZyme
Location: 162 - 2660 (+)
Gene ID: HRGMv2_2863_18_2
Type:
Location: 2716 - 3060 (-)
Type:
Location: 2716 - 3060 (-)
Gene ID: HRGMv2_2863_18_3
Type: TC
Location: 3496 - 4143 (-)
Type: TC
Location: 3496 - 4143 (-)
Gene ID: HRGMv2_2863_18_4
Type: TC
Location: 4155 - 5492 (-)
Type: TC
Location: 4155 - 5492 (-)
Gene ID: HRGMv2_2863_18_5
Type: CAZyme
Location: 5527 - 6861 (-)
Type: CAZyme
Location: 5527 - 6861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.