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Cluster: HRGMv2_2863_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2863_1 HRGMv2_2863_1_103 110813 112462 - GH36
TC HRGMv2_2863_1 HRGMv2_2863_1_104 112475 113233 - 3.A.1.3.24
TC HRGMv2_2863_1 HRGMv2_2863_1_105 113246 113890 - 3.A.1.3.14
STP HRGMv2_2863_1 HRGMv2_2863_1_106 114037 114834 - SBP_bac_3
TC HRGMv2_2863_1 HRGMv2_2863_1_107 115099 115872 + 3.A.1.3.15
TC HRGMv2_2863_1 HRGMv2_2863_1_108 115943 116701 + 3.A.1.3.14
TC HRGMv2_2863_1 HRGMv2_2863_1_109 116691 117434 + 3.A.1.3.25
Gene ID: HRGMv2_2863_1_103
Type: CAZyme
Location: 110813 - 112462 (-)
Gene ID: HRGMv2_2863_1_104
Type: TC
Location: 112475 - 113233 (-)
Gene ID: HRGMv2_2863_1_105
Type: TC
Location: 113246 - 113890 (-)
Gene ID: HRGMv2_2863_1_106
Type: STP
Location: 114037 - 114834 (-)
Gene ID: HRGMv2_2863_1_107
Type: TC
Location: 115099 - 115872 (+)
Gene ID: HRGMv2_2863_1_108
Type: TC
Location: 115943 - 116701 (+)
Gene ID: HRGMv2_2863_1_109
Type: TC
Location: 116691 - 117434 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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