Cluster: HRGMv2_2863_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2863
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2863_17 | HRGMv2_2863_17_5 | 3410 | 4768 | + | 2.A.66.1.32 |
| TC | HRGMv2_2863_17 | HRGMv2_2863_17_6 | 4999 | 7689 | + | 3.A.3.2.21 |
| TC | HRGMv2_2863_17 | HRGMv2_2863_17_7 | 7777 | 8190 | + | 2.A.7.2.1 |
| STP | HRGMv2_2863_17 | HRGMv2_2863_17_8 | 8246 | 9265 | - | PfkB |
| pfam | HRGMv2_2863_17 | HRGMv2_2863_17_9 | 9792 | 11078 | + | LytR_cpsA_psr |
| CAZyme | HRGMv2_2863_17 | HRGMv2_2863_17_10 | 11224 | 12822 | + | GH20 |
Gene ID: HRGMv2_2863_17_5
Type: TC
Location: 3410 - 4768 (+)
Type: TC
Location: 3410 - 4768 (+)
Gene ID: HRGMv2_2863_17_6
Type: TC
Location: 4999 - 7689 (+)
Type: TC
Location: 4999 - 7689 (+)
Gene ID: HRGMv2_2863_17_7
Type: TC
Location: 7777 - 8190 (+)
Type: TC
Location: 7777 - 8190 (+)
Gene ID: HRGMv2_2863_17_8
Type: STP
Location: 8246 - 9265 (-)
Type: STP
Location: 8246 - 9265 (-)
Gene ID: HRGMv2_2863_17_9
Type: pfam
Location: 9792 - 11078 (+)
Type: pfam
Location: 9792 - 11078 (+)
Gene ID: HRGMv2_2863_17_10
Type: CAZyme
Location: 11224 - 12822 (+)
Type: CAZyme
Location: 11224 - 12822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.