Cluster: HRGMv2_2863_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2863
- CGC Family ID: CGCFAM_00319
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2863_13 | HRGMv2_2863_13_43 | 47823 | 49514 | + | 3.A.1.135.5 |
| CAZyme | HRGMv2_2863_13 | HRGMv2_2863_13_44 | 49514 | 51208 | + | GH2 |
| TC | HRGMv2_2863_13 | HRGMv2_2863_13_45 | 51208 | 51765 | + | 3.D.1.8.1 |
Gene ID: HRGMv2_2863_13_43
Type: TC
Location: 47823 - 49514 (+)
Type: TC
Location: 47823 - 49514 (+)
Gene ID: HRGMv2_2863_13_44
Type: CAZyme
Location: 49514 - 51208 (+)
Type: CAZyme
Location: 49514 - 51208 (+)
Gene ID: HRGMv2_2863_13_45
Type: TC
Location: 51208 - 51765 (+)
Type: TC
Location: 51208 - 51765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.