Cluster: HRGMv2_2863_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2863
- CGC Family ID: CGCFAM_03503
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2863_9 | HRGMv2_2863_9_23 | 20758 | 22134 | - | GH28 |
| TC | HRGMv2_2863_9 | HRGMv2_2863_9_24 | 22246 | 23025 | + | 9.B.169.2.2 |
| pfam | HRGMv2_2863_9 | HRGMv2_2863_9_25 | 23045 | 23719 | + | Methyltransf_4 | Methyltransf_31 |
| TC | HRGMv2_2863_9 | HRGMv2_2863_9_26 | 23736 | 25922 | + | 2.A.53.4.2 |
Gene ID: HRGMv2_2863_9_23
Type: CAZyme
Location: 20758 - 22134 (-)
Type: CAZyme
Location: 20758 - 22134 (-)
Gene ID: HRGMv2_2863_9_24
Type: TC
Location: 22246 - 23025 (+)
Type: TC
Location: 22246 - 23025 (+)
Gene ID: HRGMv2_2863_9_25
Type: pfam
Location: 23045 - 23719 (+)
Type: pfam
Location: 23045 - 23719 (+)
Gene ID: HRGMv2_2863_9_26
Type: TC
Location: 23736 - 25922 (+)
Type: TC
Location: 23736 - 25922 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.