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Cluster: HRGMv2_2863_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2863_8 HRGMv2_2863_8_3 1176 2708 - 2.A.2.3.3
NULL(UNKNOWN) HRGMv2_2863_8 HRGMv2_2863_8_4 2759 3286 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2863_8 HRGMv2_2863_8_5 3310 3663 - 9.A.11.1.1
TC HRGMv2_2863_8 HRGMv2_2863_8_6 3716 4465 - 3.A.1.122.14
TC HRGMv2_2863_8 HRGMv2_2863_8_7 4595 5038 + 9.A.11.1.1
CAZyme HRGMv2_2863_8 HRGMv2_2863_8_8 5035 5982 - GH43_32
NULL(UNKNOWN) HRGMv2_2863_8 HRGMv2_2863_8_9 5995 6495 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2863_8 HRGMv2_2863_8_10 6594 7262 + adh_short | Epimerase | adh_short_C2
CAZyme HRGMv2_2863_8 HRGMv2_2863_8_11 7330 10335 - GH2
Gene ID: HRGMv2_2863_8_3
Type: TC
Location: 1176 - 2708 (-)
Gene ID: HRGMv2_2863_8_4
Type:
Location: 2759 - 3286 (-)
Gene ID: HRGMv2_2863_8_5
Type: TC
Location: 3310 - 3663 (-)
Gene ID: HRGMv2_2863_8_6
Type: TC
Location: 3716 - 4465 (-)
Gene ID: HRGMv2_2863_8_7
Type: TC
Location: 4595 - 5038 (+)
Gene ID: HRGMv2_2863_8_8
Type: CAZyme
Location: 5035 - 5982 (-)
Gene ID: HRGMv2_2863_8_9
Type:
Location: 5995 - 6495 (-)
Gene ID: HRGMv2_2863_8_10
Type: pfam
Location: 6594 - 7262 (+)
Gene ID: HRGMv2_2863_8_11
Type: CAZyme
Location: 7330 - 10335 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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