Cluster: HRGMv2_2863_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2863
- CGC Family ID: CGCFAM_07629
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2863_1 | HRGMv2_2863_1_24 | 28489 | 29883 | - | 2.A.22.5.3 |
| TC | HRGMv2_2863_1 | HRGMv2_2863_1_25 | 30070 | 30774 | + | 2.A.78.1.1 |
| TC | HRGMv2_2863_1 | HRGMv2_2863_1_26 | 30774 | 31103 | + | 2.A.78.1.1 |
| TC | HRGMv2_2863_1 | HRGMv2_2863_1_27 | 31120 | 32472 | - | 2.A.66.1.28 |
| CAZyme | HRGMv2_2863_1 | HRGMv2_2863_1_28 | 32472 | 33842 | - | GH30_4 |
Gene ID: HRGMv2_2863_1_24
Type: TC
Location: 28489 - 29883 (-)
Type: TC
Location: 28489 - 29883 (-)
Gene ID: HRGMv2_2863_1_25
Type: TC
Location: 30070 - 30774 (+)
Type: TC
Location: 30070 - 30774 (+)
Gene ID: HRGMv2_2863_1_26
Type: TC
Location: 30774 - 31103 (+)
Type: TC
Location: 30774 - 31103 (+)
Gene ID: HRGMv2_2863_1_27
Type: TC
Location: 31120 - 32472 (-)
Type: TC
Location: 31120 - 32472 (-)
Gene ID: HRGMv2_2863_1_28
Type: CAZyme
Location: 32472 - 33842 (-)
Type: CAZyme
Location: 32472 - 33842 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.