Cluster: HRGMv2_2857_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2857
- CGC Family ID: CGCFAM_05147
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2857_4 | HRGMv2_2857_4_21 | 26320 | 28143 | - | 8.A.59.2.2 |
| TC | HRGMv2_2857_4 | HRGMv2_2857_4_22 | 28362 | 29399 | + | 9.B.34.1.3 |
| pfam | HRGMv2_2857_4 | HRGMv2_2857_4_23 | 29419 | 29964 | + | CobU |
| TC | HRGMv2_2857_4 | HRGMv2_2857_4_24 | 29980 | 31041 | + | 3.A.15.2.1 |
| CAZyme | HRGMv2_2857_4 | HRGMv2_2857_4_25 | 31442 | 32989 | - | GH13_44 |
Gene ID: HRGMv2_2857_4_21
Type: TC
Location: 26320 - 28143 (-)
Type: TC
Location: 26320 - 28143 (-)
Gene ID: HRGMv2_2857_4_22
Type: TC
Location: 28362 - 29399 (+)
Type: TC
Location: 28362 - 29399 (+)
Gene ID: HRGMv2_2857_4_23
Type: pfam
Location: 29419 - 29964 (+)
Type: pfam
Location: 29419 - 29964 (+)
Gene ID: HRGMv2_2857_4_24
Type: TC
Location: 29980 - 31041 (+)
Type: TC
Location: 29980 - 31041 (+)
Gene ID: HRGMv2_2857_4_25
Type: CAZyme
Location: 31442 - 32989 (-)
Type: CAZyme
Location: 31442 - 32989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.