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Cluster: HRGMv2_2857_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2857_4 HRGMv2_2857_4_4 5495 6559 + 3.A.1.14.18
TC HRGMv2_2857_4 HRGMv2_2857_4_5 6644 7585 + 3.A.1.14.9
TC HRGMv2_2857_4 HRGMv2_2857_4_6 7590 8345 + 3.A.1.14.7
peptidase HRGMv2_2857_4 HRGMv2_2857_4_7 8504 9430 - M15.UPB
TC HRGMv2_2857_4 HRGMv2_2857_4_8 9615 11066 + 1.B.52.2.1
pfam HRGMv2_2857_4 HRGMv2_2857_4_9 11490 11939 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 | Acetyltransf_10
pfam HRGMv2_2857_4 HRGMv2_2857_4_10 11942 12700 - Ubie_methyltran | CMAS | TehB | MTS | Methyltransf_11 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_2857_4 HRGMv2_2857_4_11 12908 14698 - GH146
CAZyme HRGMv2_2857_4 HRGMv2_2857_4_12 14711 18202 - GH2
Gene ID: HRGMv2_2857_4_4
Type: TC
Location: 5495 - 6559 (+)
Gene ID: HRGMv2_2857_4_5
Type: TC
Location: 6644 - 7585 (+)
Gene ID: HRGMv2_2857_4_6
Type: TC
Location: 7590 - 8345 (+)
Gene ID: HRGMv2_2857_4_7
Type: peptidase
Location: 8504 - 9430 (-)
Gene ID: HRGMv2_2857_4_8
Type: TC
Location: 9615 - 11066 (+)
Gene ID: HRGMv2_2857_4_9
Type: pfam
Location: 11490 - 11939 (-)
Gene ID: HRGMv2_2857_4_10
Type: pfam
Location: 11942 - 12700 (-)
Gene ID: HRGMv2_2857_4_11
Type: CAZyme
Location: 12908 - 14698 (-)
Gene ID: HRGMv2_2857_4_12
Type: CAZyme
Location: 14711 - 18202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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