Cluster: HRGMv2_2857_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2857
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2857_2 | HRGMv2_2857_2_103 | 103344 | 103904 | + | GH23 |
| peptidase | HRGMv2_2857_2 | HRGMv2_2857_2_104 | 103924 | 105327 | + | M18.UPW |
| TC | HRGMv2_2857_2 | HRGMv2_2857_2_105 | 105556 | 106635 | + | 3.A.1.11.8 |
| TC | HRGMv2_2857_2 | HRGMv2_2857_2_106 | 106625 | 107437 | + | 3.A.1.11.8 |
| TC | HRGMv2_2857_2 | HRGMv2_2857_2_107 | 107451 | 108251 | + | 3.A.1.11.7 |
| TC | HRGMv2_2857_2 | HRGMv2_2857_2_108 | 108251 | 109534 | + | 3.A.1.11.7 |
Gene ID: HRGMv2_2857_2_103
Type: CAZyme
Location: 103344 - 103904 (+)
Type: CAZyme
Location: 103344 - 103904 (+)
Gene ID: HRGMv2_2857_2_104
Type: peptidase
Location: 103924 - 105327 (+)
Type: peptidase
Location: 103924 - 105327 (+)
Gene ID: HRGMv2_2857_2_105
Type: TC
Location: 105556 - 106635 (+)
Type: TC
Location: 105556 - 106635 (+)
Gene ID: HRGMv2_2857_2_106
Type: TC
Location: 106625 - 107437 (+)
Type: TC
Location: 106625 - 107437 (+)
Gene ID: HRGMv2_2857_2_107
Type: TC
Location: 107451 - 108251 (+)
Type: TC
Location: 107451 - 108251 (+)
Gene ID: HRGMv2_2857_2_108
Type: TC
Location: 108251 - 109534 (+)
Type: TC
Location: 108251 - 109534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.