Cluster: HRGMv2_2857_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2857
- CGC Family ID: CGCFAM_01725
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2857_78 | HRGMv2_2857_78_1 | 119 | 2728 | - | 3.A.3.2.21 |
| NULL(UNKNOWN) | HRGMv2_2857_78 | HRGMv2_2857_78_2 | 3093 | 4355 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2857_78 | HRGMv2_2857_78_3 | 4741 | 6432 | + | SWIM |
| CAZyme | HRGMv2_2857_78 | HRGMv2_2857_78_4 | 6482 | 8611 | - | GH3 |
Gene ID: HRGMv2_2857_78_1
Type: TC
Location: 119 - 2728 (-)
Type: TC
Location: 119 - 2728 (-)
Gene ID: HRGMv2_2857_78_2
Type:
Location: 3093 - 4355 (+)
Type:
Location: 3093 - 4355 (+)
Gene ID: HRGMv2_2857_78_3
Type: pfam
Location: 4741 - 6432 (+)
Type: pfam
Location: 4741 - 6432 (+)
Gene ID: HRGMv2_2857_78_4
Type: CAZyme
Location: 6482 - 8611 (-)
Type: CAZyme
Location: 6482 - 8611 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.