Cluster: HRGMv2_2857_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2857
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2857_74 | HRGMv2_2857_74_1 | 135 | 1658 | + | GH77 |
| pfam | HRGMv2_2857_74 | HRGMv2_2857_74_2 | 2089 | 2541 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_2857_74 | HRGMv2_2857_74_3 | 2542 | 3498 | - | 3.A.1.2.17 |
| TC | HRGMv2_2857_74 | HRGMv2_2857_74_4 | 3498 | 4592 | - | 3.A.1.2.10 |
| TC | HRGMv2_2857_74 | HRGMv2_2857_74_5 | 4585 | 6129 | - | 3.A.1.2.12 |
| CAZyme | HRGMv2_2857_74 | HRGMv2_2857_74_6 | 6449 | 7828 | - | GH5_4 |
Gene ID: HRGMv2_2857_74_1
Type: CAZyme
Location: 135 - 1658 (+)
Type: CAZyme
Location: 135 - 1658 (+)
Gene ID: HRGMv2_2857_74_2
Type: pfam
Location: 2089 - 2541 (-)
Type: pfam
Location: 2089 - 2541 (-)
Gene ID: HRGMv2_2857_74_3
Type: TC
Location: 2542 - 3498 (-)
Type: TC
Location: 2542 - 3498 (-)
Gene ID: HRGMv2_2857_74_4
Type: TC
Location: 3498 - 4592 (-)
Type: TC
Location: 3498 - 4592 (-)
Gene ID: HRGMv2_2857_74_5
Type: TC
Location: 4585 - 6129 (-)
Type: TC
Location: 4585 - 6129 (-)
Gene ID: HRGMv2_2857_74_6
Type: CAZyme
Location: 6449 - 7828 (-)
Type: CAZyme
Location: 6449 - 7828 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.