dbCAN Logo

Cluster: HRGMv2_2857_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2857_71 HRGMv2_2857_71_1 146 1441 + 3.D.6.1.2
TC HRGMv2_2857_71 HRGMv2_2857_71_2 1456 2430 + 3.D.6.1.2
pfam HRGMv2_2857_71 HRGMv2_2857_71_3 2430 3086 + FMN_bind
TC HRGMv2_2857_71 HRGMv2_2857_71_4 3079 3765 + 3.D.6.1.2
TC HRGMv2_2857_71 HRGMv2_2857_71_5 3765 4343 + 3.D.6.1.2
TC HRGMv2_2857_71 HRGMv2_2857_71_6 4359 5330 + 3.D.6.1.4
pfam HRGMv2_2857_71 HRGMv2_2857_71_7 5483 5767 + RelB
pfam HRGMv2_2857_71 HRGMv2_2857_71_8 5760 6017 + YoeB_toxin
CAZyme HRGMv2_2857_71 HRGMv2_2857_71_9 6186 8582 - GT35
Gene ID: HRGMv2_2857_71_1
Type: TC
Location: 146 - 1441 (+)
Gene ID: HRGMv2_2857_71_2
Type: TC
Location: 1456 - 2430 (+)
Gene ID: HRGMv2_2857_71_3
Type: pfam
Location: 2430 - 3086 (+)
Gene ID: HRGMv2_2857_71_4
Type: TC
Location: 3079 - 3765 (+)
Gene ID: HRGMv2_2857_71_5
Type: TC
Location: 3765 - 4343 (+)
Gene ID: HRGMv2_2857_71_6
Type: TC
Location: 4359 - 5330 (+)
Gene ID: HRGMv2_2857_71_7
Type: pfam
Location: 5483 - 5767 (+)
Gene ID: HRGMv2_2857_71_8
Type: pfam
Location: 5760 - 6017 (+)
Gene ID: HRGMv2_2857_71_9
Type: CAZyme
Location: 6186 - 8582 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List