Cluster: HRGMv2_2857_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2857
- CGC Family ID: CGCFAM_02034
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2857_51 | HRGMv2_2857_51_4 | 2217 | 5567 | + | GH2 |
| pfam | HRGMv2_2857_51 | HRGMv2_2857_51_5 | 5582 | 6640 | + | Peptidase_C39_2 |
| TC | HRGMv2_2857_51 | HRGMv2_2857_51_6 | 6660 | 7367 | + | 3.A.16.1.3 |
| pfam | HRGMv2_2857_51 | HRGMv2_2857_51_7 | 7484 | 8341 | - | Choline_bind_1 | Choline_bind_3 |
| CAZyme | HRGMv2_2857_51 | HRGMv2_2857_51_8 | 8360 | 10426 | - | GH5_1 |
Gene ID: HRGMv2_2857_51_4
Type: CAZyme
Location: 2217 - 5567 (+)
Type: CAZyme
Location: 2217 - 5567 (+)
Gene ID: HRGMv2_2857_51_5
Type: pfam
Location: 5582 - 6640 (+)
Type: pfam
Location: 5582 - 6640 (+)
Gene ID: HRGMv2_2857_51_6
Type: TC
Location: 6660 - 7367 (+)
Type: TC
Location: 6660 - 7367 (+)
Gene ID: HRGMv2_2857_51_7
Type: pfam
Location: 7484 - 8341 (-)
Type: pfam
Location: 7484 - 8341 (-)
Gene ID: HRGMv2_2857_51_8
Type: CAZyme
Location: 8360 - 10426 (-)
Type: CAZyme
Location: 8360 - 10426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.