Cluster: HRGMv2_2857_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2857
- CGC Family ID: CGCFAM_06038
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2857_32 | HRGMv2_2857_32_2 | 590 | 2680 | + | 3.A.3.32.6 |
| TC | HRGMv2_2857_32 | HRGMv2_2857_32_3 | 3332 | 4117 | + | 2.A.5.5.2 |
| TC | HRGMv2_2857_32 | HRGMv2_2857_32_4 | 4351 | 5193 | + | 3.A.1.134.3 |
| pfam | HRGMv2_2857_32 | HRGMv2_2857_32_5 | 5206 | 8181 | + | FtsX | FtsX |
| pfam | HRGMv2_2857_32 | HRGMv2_2857_32_6 | 8363 | 9373 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | GDP_Man_Dehyd |
| CAZyme | HRGMv2_2857_32 | HRGMv2_2857_32_7 | 9917 | 11194 | - | GH18 |
Gene ID: HRGMv2_2857_32_2
Type: TC
Location: 590 - 2680 (+)
Type: TC
Location: 590 - 2680 (+)
Gene ID: HRGMv2_2857_32_3
Type: TC
Location: 3332 - 4117 (+)
Type: TC
Location: 3332 - 4117 (+)
Gene ID: HRGMv2_2857_32_4
Type: TC
Location: 4351 - 5193 (+)
Type: TC
Location: 4351 - 5193 (+)
Gene ID: HRGMv2_2857_32_5
Type: pfam
Location: 5206 - 8181 (+)
Type: pfam
Location: 5206 - 8181 (+)
Gene ID: HRGMv2_2857_32_6
Type: pfam
Location: 8363 - 9373 (+)
Type: pfam
Location: 8363 - 9373 (+)
Gene ID: HRGMv2_2857_32_7
Type: CAZyme
Location: 9917 - 11194 (-)
Type: CAZyme
Location: 9917 - 11194 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.