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Cluster: HRGMv2_2857_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2857_28 HRGMv2_2857_28_9 12276 13460 + GH130_1
pfam HRGMv2_2857_28 HRGMv2_2857_28_10 14055 15947 + CN_hydrolase | NAD_synthase
TC HRGMv2_2857_28 HRGMv2_2857_28_11 16312 18273 + 1.B.52.2.2
TC HRGMv2_2857_28 HRGMv2_2857_28_12 19024 19632 - 2.A.115.2.14
pfam HRGMv2_2857_28 HRGMv2_2857_28_13 19879 20604 + AzlC
pfam HRGMv2_2857_28 HRGMv2_2857_28_14 20597 20923 + AzlD
CAZyme HRGMv2_2857_28 HRGMv2_2857_28_15 21287 23242 - GH13_14
Gene ID: HRGMv2_2857_28_9
Type: CAZyme
Location: 12276 - 13460 (+)
Gene ID: HRGMv2_2857_28_10
Type: pfam
Location: 14055 - 15947 (+)
Gene ID: HRGMv2_2857_28_11
Type: TC
Location: 16312 - 18273 (+)
Gene ID: HRGMv2_2857_28_12
Type: TC
Location: 19024 - 19632 (-)
Gene ID: HRGMv2_2857_28_13
Type: pfam
Location: 19879 - 20604 (+)
Gene ID: HRGMv2_2857_28_14
Type: pfam
Location: 20597 - 20923 (+)
Gene ID: HRGMv2_2857_28_15
Type: CAZyme
Location: 21287 - 23242 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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