Cluster: HRGMv2_2857_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2857
- CGC Family ID: CGCFAM_10195
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2857_23 | HRGMv2_2857_23_7 | 11269 | 12627 | - | 1.A.26.1.2 |
| NULL(UNKNOWN) | HRGMv2_2857_23 | HRGMv2_2857_23_8 | 13107 | 13916 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2857_23 | HRGMv2_2857_23_9 | 13930 | 14781 | - | 3.A.1.132.1 |
| TF | HRGMv2_2857_23 | HRGMv2_2857_23_10 | 14768 | 15145 | - | GntR |
| CAZyme | HRGMv2_2857_23 | HRGMv2_2857_23_11 | 15326 | 17731 | - | GH59 |
Gene ID: HRGMv2_2857_23_7
Type: TC
Location: 11269 - 12627 (-)
Type: TC
Location: 11269 - 12627 (-)
Gene ID: HRGMv2_2857_23_8
Type:
Location: 13107 - 13916 (-)
Type:
Location: 13107 - 13916 (-)
Gene ID: HRGMv2_2857_23_9
Type: TC
Location: 13930 - 14781 (-)
Type: TC
Location: 13930 - 14781 (-)
Gene ID: HRGMv2_2857_23_10
Type: TF
Location: 14768 - 15145 (-)
Type: TF
Location: 14768 - 15145 (-)
Gene ID: HRGMv2_2857_23_11
Type: CAZyme
Location: 15326 - 17731 (-)
Type: CAZyme
Location: 15326 - 17731 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.