Cluster: HRGMv2_2857_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2857
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2857_8 | HRGMv2_2857_8_13 | 12402 | 13805 | - | 2.A.25.1.4 |
| pfam | HRGMv2_2857_8 | HRGMv2_2857_8_14 | 13974 | 14519 | + | bPH_2 |
| pfam | HRGMv2_2857_8 | HRGMv2_2857_8_15 | 14516 | 15979 | + | bPH_2 | bPH_2 | bPH_2 |
| CAZyme | HRGMv2_2857_8 | HRGMv2_2857_8_16 | 15998 | 17224 | - | GH16_3 |
Gene ID: HRGMv2_2857_8_13
Type: TC
Location: 12402 - 13805 (-)
Type: TC
Location: 12402 - 13805 (-)
Gene ID: HRGMv2_2857_8_14
Type: pfam
Location: 13974 - 14519 (+)
Type: pfam
Location: 13974 - 14519 (+)
Gene ID: HRGMv2_2857_8_15
Type: pfam
Location: 14516 - 15979 (+)
Type: pfam
Location: 14516 - 15979 (+)
Gene ID: HRGMv2_2857_8_16
Type: CAZyme
Location: 15998 - 17224 (-)
Type: CAZyme
Location: 15998 - 17224 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp937926145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.