Cluster: HRGMv2_2853_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2853
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2853_10 | HRGMv2_2853_10_47 | 48358 | 49320 | + | GT2 |
| pfam | HRGMv2_2853_10 | HRGMv2_2853_10_48 | 49320 | 49877 | + | LemA |
| pfam | HRGMv2_2853_10 | HRGMv2_2853_10_49 | 49877 | 51598 | + | DUF2207 | DUF2207_C |
| TC | HRGMv2_2853_10 | HRGMv2_2853_10_50 | 51653 | 53008 | - | 2.A.66.1.37 |
| TC | HRGMv2_2853_10 | HRGMv2_2853_10_51 | 53113 | 54033 | - | 8.A.21.2.2 |
Gene ID: HRGMv2_2853_10_47
Type: CAZyme
Location: 48358 - 49320 (+)
Type: CAZyme
Location: 48358 - 49320 (+)
Gene ID: HRGMv2_2853_10_48
Type: pfam
Location: 49320 - 49877 (+)
Type: pfam
Location: 49320 - 49877 (+)
Gene ID: HRGMv2_2853_10_49
Type: pfam
Location: 49877 - 51598 (+)
Type: pfam
Location: 49877 - 51598 (+)
Gene ID: HRGMv2_2853_10_50
Type: TC
Location: 51653 - 53008 (-)
Type: TC
Location: 51653 - 53008 (-)
Gene ID: HRGMv2_2853_10_51
Type: TC
Location: 53113 - 54033 (-)
Type: TC
Location: 53113 - 54033 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.