Cluster: HRGMv2_2853_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2853
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2853_5 | HRGMv2_2853_5_157 | 170576 | 171811 | - | 9.A.40.2.2 |
| pfam | HRGMv2_2853_5 | HRGMv2_2853_5_158 | 171935 | 173359 | - | Radical_SAM |
| CAZyme | HRGMv2_2853_5 | HRGMv2_2853_5_159 | 173479 | 176538 | - | GH2 |
| TC | HRGMv2_2853_5 | HRGMv2_2853_5_160 | 176578 | 177195 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_2853_5 | HRGMv2_2853_5_161 | 177429 | 178022 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2853_5 | HRGMv2_2853_5_162 | 178158 | 180965 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_2853_5_157
Type: TC
Location: 170576 - 171811 (-)
Type: TC
Location: 170576 - 171811 (-)
Gene ID: HRGMv2_2853_5_158
Type: pfam
Location: 171935 - 173359 (-)
Type: pfam
Location: 171935 - 173359 (-)
Gene ID: HRGMv2_2853_5_159
Type: CAZyme
Location: 173479 - 176538 (-)
Type: CAZyme
Location: 173479 - 176538 (-)
Gene ID: HRGMv2_2853_5_160
Type: TC
Location: 176578 - 177195 (-)
Type: TC
Location: 176578 - 177195 (-)
Gene ID: HRGMv2_2853_5_161
Type:
Location: 177429 - 178022 (+)
Type:
Location: 177429 - 178022 (+)
Gene ID: HRGMv2_2853_5_162
Type: TC
Location: 178158 - 180965 (+)
Type: TC
Location: 178158 - 180965 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2853_5_158 | vegetarian > omnivore | 1.64660 | 0.00711 |