Cluster: HRGMv2_2853_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2853
- CGC Family ID: CGCFAM_09436
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2853_5 | HRGMv2_2853_5_90 | 99981 | 102206 | + | 3.A.7.16.1 |
| TC | HRGMv2_2853_5 | HRGMv2_2853_5_91 | 102264 | 103292 | + | 1.A.33.1.5 |
| pfam | HRGMv2_2853_5 | HRGMv2_2853_5_92 | 103289 | 103750 | + | CobA_CobO_BtuR |
| pfam | HRGMv2_2853_5 | HRGMv2_2853_5_93 | 103756 | 104541 | - | Asparaginase |
| CAZyme | HRGMv2_2853_5 | HRGMv2_2853_5_94 | 104541 | 106628 | - | GH95 |
Gene ID: HRGMv2_2853_5_90
Type: TC
Location: 99981 - 102206 (+)
Type: TC
Location: 99981 - 102206 (+)
Gene ID: HRGMv2_2853_5_91
Type: TC
Location: 102264 - 103292 (+)
Type: TC
Location: 102264 - 103292 (+)
Gene ID: HRGMv2_2853_5_92
Type: pfam
Location: 103289 - 103750 (+)
Type: pfam
Location: 103289 - 103750 (+)
Gene ID: HRGMv2_2853_5_93
Type: pfam
Location: 103756 - 104541 (-)
Type: pfam
Location: 103756 - 104541 (-)
Gene ID: HRGMv2_2853_5_94
Type: CAZyme
Location: 104541 - 106628 (-)
Type: CAZyme
Location: 104541 - 106628 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.