dbCAN Logo

Cluster: HRGMv2_2853_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_33 35202 36290 + GT4
NULL(UNKNOWN) HRGMv2_2853_5 HRGMv2_2853_5_34 36287 36634 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2853_5 HRGMv2_2853_5_35 36636 36845 + Hexapep
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_36 36848 37951 + GT4
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_37 37948 38820 + GT2
pfam HRGMv2_2853_5 HRGMv2_2853_5_38 38832 39629 + Acyl_transf_3
TC HRGMv2_2853_5 HRGMv2_2853_5_39 39893 41044 + 9.B.183.1.9
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_40 41089 41817 + GT32
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_41 41836 42915 + GT4
pfam HRGMv2_2853_5 HRGMv2_2853_5_42 42925 43560 + DUF1919
pfam HRGMv2_2853_5 HRGMv2_2853_5_43 43557 44627 + Acyl_transf_3
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_44 44614 45525 + GT2
pfam HRGMv2_2853_5 HRGMv2_2853_5_45 45540 46346 + LicD
CAZyme HRGMv2_2853_5 HRGMv2_2853_5_46 46514 47173 + GT2
Gene ID: HRGMv2_2853_5_33
Type: CAZyme
Location: 35202 - 36290 (+)
Gene ID: HRGMv2_2853_5_34
Type:
Location: 36287 - 36634 (+)
Gene ID: HRGMv2_2853_5_35
Type: pfam
Location: 36636 - 36845 (+)
Gene ID: HRGMv2_2853_5_36
Type: CAZyme
Location: 36848 - 37951 (+)
Gene ID: HRGMv2_2853_5_37
Type: CAZyme
Location: 37948 - 38820 (+)
Gene ID: HRGMv2_2853_5_38
Type: pfam
Location: 38832 - 39629 (+)
Gene ID: HRGMv2_2853_5_39
Type: TC
Location: 39893 - 41044 (+)
Gene ID: HRGMv2_2853_5_40
Type: CAZyme
Location: 41089 - 41817 (+)
Gene ID: HRGMv2_2853_5_41
Type: CAZyme
Location: 41836 - 42915 (+)
Gene ID: HRGMv2_2853_5_42
Type: pfam
Location: 42925 - 43560 (+)
Gene ID: HRGMv2_2853_5_43
Type: pfam
Location: 43557 - 44627 (+)
Gene ID: HRGMv2_2853_5_44
Type: CAZyme
Location: 44614 - 45525 (+)
Gene ID: HRGMv2_2853_5_45
Type: pfam
Location: 45540 - 46346 (+)
Gene ID: HRGMv2_2853_5_46
Type: CAZyme
Location: 46514 - 47173 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List