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Cluster: HRGMv2_2853_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2853_4 HRGMv2_2853_4_152 160107 161747 - GH36
TC HRGMv2_2853_4 HRGMv2_2853_4_153 161812 162570 - 3.A.1.3.24
TC HRGMv2_2853_4 HRGMv2_2853_4_154 162582 163223 - 3.A.1.3.15
STP HRGMv2_2853_4 HRGMv2_2853_4_155 163348 164136 - SBP_bac_3
TC HRGMv2_2853_4 HRGMv2_2853_4_156 164374 165138 + 3.A.1.3.15
TC HRGMv2_2853_4 HRGMv2_2853_4_157 165218 165979 + 3.A.1.3.12
TC HRGMv2_2853_4 HRGMv2_2853_4_158 165969 166712 + 3.A.1.3.25
Gene ID: HRGMv2_2853_4_152
Type: CAZyme
Location: 160107 - 161747 (-)
Gene ID: HRGMv2_2853_4_153
Type: TC
Location: 161812 - 162570 (-)
Gene ID: HRGMv2_2853_4_154
Type: TC
Location: 162582 - 163223 (-)
Gene ID: HRGMv2_2853_4_155
Type: STP
Location: 163348 - 164136 (-)
Gene ID: HRGMv2_2853_4_156
Type: TC
Location: 164374 - 165138 (+)
Gene ID: HRGMv2_2853_4_157
Type: TC
Location: 165218 - 165979 (+)
Gene ID: HRGMv2_2853_4_158
Type: TC
Location: 165969 - 166712 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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