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Cluster: HRGMv2_2853_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2853_4 HRGMv2_2853_4_43 38277 39065 - 2.A.102.4.4
sulfatase HRGMv2_2853_4 HRGMv2_2853_4_44 39228 40535 + S1_65
TC HRGMv2_2853_4 HRGMv2_2853_4_45 40665 42053 - 2.A.22.5.3
TC HRGMv2_2853_4 HRGMv2_2853_4_46 42324 43037 + 2.A.78.1.1
TC HRGMv2_2853_4 HRGMv2_2853_4_47 43034 43372 + 2.A.78.1.1
pfam HRGMv2_2853_4 HRGMv2_2853_4_48 43472 44074 - DUF308 | DUF308 | DUF308
pfam HRGMv2_2853_4 HRGMv2_2853_4_49 44082 46124 - GTP_EFTU | EFG_C | MMR_HSR1 | EFG_IV | EFG_III | EF-G_D2
TC HRGMv2_2853_4 HRGMv2_2853_4_50 46400 46873 + 3.D.1.6.4
TC HRGMv2_2853_4 HRGMv2_2853_4_51 46870 48615 + 3.D.1.5.1
TC HRGMv2_2853_4 HRGMv2_2853_4_52 48632 50830 + 3.D.1.6.2
pfam HRGMv2_2853_4 HRGMv2_2853_4_53 50852 51652 + VanZ
pfam HRGMv2_2853_4 HRGMv2_2853_4_54 51703 52482 - TauE
TC HRGMv2_2853_4 HRGMv2_2853_4_55 52631 54160 - 2.A.2.3.3
NULL(UNKNOWN) HRGMv2_2853_4 HRGMv2_2853_4_56 54236 54745 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2853_4 HRGMv2_2853_4_57 54769 55122 - 9.A.11.1.1
TC HRGMv2_2853_4 HRGMv2_2853_4_58 55173 55922 - 3.A.1.122.14
TC HRGMv2_2853_4 HRGMv2_2853_4_59 56048 56491 + 9.A.11.1.1
CAZyme HRGMv2_2853_4 HRGMv2_2853_4_60 56488 57435 - GH43_32
NULL(UNKNOWN) HRGMv2_2853_4 HRGMv2_2853_4_61 57447 57947 - NULL(UNKNOWN)
[View Structural Homologs]
sulfatase HRGMv2_2853_4 HRGMv2_2853_4_62 58098 58763 + S1_6
TC HRGMv2_2853_4 HRGMv2_2853_4_63 58834 60783 - 9.B.18.2.1
NULL(UNKNOWN) HRGMv2_2853_4 HRGMv2_2853_4_64 60925 61095 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2853_4 HRGMv2_2853_4_65 61102 62307 - NTP_transf_5
TC HRGMv2_2853_4 HRGMv2_2853_4_66 62421 63926 - 4.C.1.1.7
Gene ID: HRGMv2_2853_4_43
Type: TC
Location: 38277 - 39065 (-)
Gene ID: HRGMv2_2853_4_44
Type: sulfatase
Location: 39228 - 40535 (+)
Gene ID: HRGMv2_2853_4_45
Type: TC
Location: 40665 - 42053 (-)
Gene ID: HRGMv2_2853_4_46
Type: TC
Location: 42324 - 43037 (+)
Gene ID: HRGMv2_2853_4_47
Type: TC
Location: 43034 - 43372 (+)
Gene ID: HRGMv2_2853_4_48
Type: pfam
Location: 43472 - 44074 (-)
Gene ID: HRGMv2_2853_4_49
Type: pfam
Location: 44082 - 46124 (-)
Gene ID: HRGMv2_2853_4_50
Type: TC
Location: 46400 - 46873 (+)
Gene ID: HRGMv2_2853_4_51
Type: TC
Location: 46870 - 48615 (+)
Gene ID: HRGMv2_2853_4_52
Type: TC
Location: 48632 - 50830 (+)
Gene ID: HRGMv2_2853_4_53
Type: pfam
Location: 50852 - 51652 (+)
Gene ID: HRGMv2_2853_4_54
Type: pfam
Location: 51703 - 52482 (-)
Gene ID: HRGMv2_2853_4_55
Type: TC
Location: 52631 - 54160 (-)
Gene ID: HRGMv2_2853_4_56
Type:
Location: 54236 - 54745 (-)
Gene ID: HRGMv2_2853_4_57
Type: TC
Location: 54769 - 55122 (-)
Gene ID: HRGMv2_2853_4_58
Type: TC
Location: 55173 - 55922 (-)
Gene ID: HRGMv2_2853_4_59
Type: TC
Location: 56048 - 56491 (+)
Gene ID: HRGMv2_2853_4_60
Type: CAZyme
Location: 56488 - 57435 (-)
Gene ID: HRGMv2_2853_4_61
Type:
Location: 57447 - 57947 (-)
Gene ID: HRGMv2_2853_4_62
Type: sulfatase
Location: 58098 - 58763 (+)
Gene ID: HRGMv2_2853_4_63
Type: TC
Location: 58834 - 60783 (-)
Gene ID: HRGMv2_2853_4_64
Type:
Location: 60925 - 61095 (+)
Gene ID: HRGMv2_2853_4_65
Type: pfam
Location: 61102 - 62307 (-)
Gene ID: HRGMv2_2853_4_66
Type: TC
Location: 62421 - 63926 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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