Cluster: HRGMv2_2853_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2853
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2853_1 | HRGMv2_2853_1_29 | 37552 | 39579 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2853_1 | HRGMv2_2853_1_30 | 39600 | 40805 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2853_1 | HRGMv2_2853_1_31 | 40808 | 41929 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2853_1 | HRGMv2_2853_1_32 | 41942 | 43369 | + | GT5 |
| NULL(UNKNOWN) | HRGMv2_2853_1 | HRGMv2_2853_1_33 | 43444 | 44100 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2853_1 | HRGMv2_2853_1_34 | 44069 | 44926 | - | 3.A.1.148.3 |
Gene ID: HRGMv2_2853_1_29
Type: CAZyme
Location: 37552 - 39579 (+)
Type: CAZyme
Location: 37552 - 39579 (+)
Gene ID: HRGMv2_2853_1_30
Type: pfam
Location: 39600 - 40805 (+)
Type: pfam
Location: 39600 - 40805 (+)
Gene ID: HRGMv2_2853_1_31
Type: pfam
Location: 40808 - 41929 (+)
Type: pfam
Location: 40808 - 41929 (+)
Gene ID: HRGMv2_2853_1_32
Type: CAZyme
Location: 41942 - 43369 (+)
Type: CAZyme
Location: 41942 - 43369 (+)
Gene ID: HRGMv2_2853_1_33
Type:
Location: 43444 - 44100 (-)
Type:
Location: 43444 - 44100 (-)
Gene ID: HRGMv2_2853_1_34
Type: TC
Location: 44069 - 44926 (-)
Type: TC
Location: 44069 - 44926 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.