Cluster: HRGMv2_2847_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2847
- CGC Family ID: CGCFAM_00532
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2847_2 | HRGMv2_2847_2_14 | 7903 | 9099 | - | GT4 |
| pfam | HRGMv2_2847_2 | HRGMv2_2847_2_15 | 9184 | 9921 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | HRGMv2_2847_2 | HRGMv2_2847_2_16 | 9918 | 10637 | - | 3.A.1.124.3 |
| NULL(UNKNOWN) | HRGMv2_2847_2 | HRGMv2_2847_2_17 | 10778 | 11611 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2847_2 | HRGMv2_2847_2_18 | 11769 | 12632 | - | 2.A.7.2.1 |
Gene ID: HRGMv2_2847_2_14
Type: CAZyme
Location: 7903 - 9099 (-)
Type: CAZyme
Location: 7903 - 9099 (-)
Gene ID: HRGMv2_2847_2_15
Type: pfam
Location: 9184 - 9921 (-)
Type: pfam
Location: 9184 - 9921 (-)
Gene ID: HRGMv2_2847_2_16
Type: TC
Location: 9918 - 10637 (-)
Type: TC
Location: 9918 - 10637 (-)
Gene ID: HRGMv2_2847_2_17
Type:
Location: 10778 - 11611 (-)
Type:
Location: 10778 - 11611 (-)
Gene ID: HRGMv2_2847_2_18
Type: TC
Location: 11769 - 12632 (-)
Type: TC
Location: 11769 - 12632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas ammoniilytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.