Cluster: HRGMv2_2847_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2847
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2847_27 | HRGMv2_2847_27_1 | 181 | 1494 | - | 9.A.40.1.1 |
| CAZyme | HRGMv2_2847_27 | HRGMv2_2847_27_2 | 2106 | 4562 | - | GH94 |
| TC | HRGMv2_2847_27 | HRGMv2_2847_27_3 | 4697 | 6835 | - | 9.A.8.1.5 |
| pfam | HRGMv2_2847_27 | HRGMv2_2847_27_4 | 7210 | 7425 | + | DUF378 |
| CAZyme | HRGMv2_2847_27 | HRGMv2_2847_27_5 | 7585 | 8745 | + | PL31 |
| TC | HRGMv2_2847_27 | HRGMv2_2847_27_6 | 8747 | 11389 | - | 3.A.3.2.21 |
Gene ID: HRGMv2_2847_27_1
Type: TC
Location: 181 - 1494 (-)
Type: TC
Location: 181 - 1494 (-)
Gene ID: HRGMv2_2847_27_2
Type: CAZyme
Location: 2106 - 4562 (-)
Type: CAZyme
Location: 2106 - 4562 (-)
Gene ID: HRGMv2_2847_27_3
Type: TC
Location: 4697 - 6835 (-)
Type: TC
Location: 4697 - 6835 (-)
Gene ID: HRGMv2_2847_27_4
Type: pfam
Location: 7210 - 7425 (+)
Type: pfam
Location: 7210 - 7425 (+)
Gene ID: HRGMv2_2847_27_5
Type: CAZyme
Location: 7585 - 8745 (+)
Type: CAZyme
Location: 7585 - 8745 (+)
Gene ID: HRGMv2_2847_27_6
Type: TC
Location: 8747 - 11389 (-)
Type: TC
Location: 8747 - 11389 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas ammoniilytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.