Cluster: HRGMv2_2847_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2847
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2847_8 | HRGMv2_2847_8_64 | 76824 | 79205 | + | GH94 |
| CAZyme | HRGMv2_2847_8 | HRGMv2_2847_8_65 | 79259 | 81040 | - | GH13_9 |
| TF | HRGMv2_2847_8 | HRGMv2_2847_8_66 | 81027 | 81482 | - | MarR |
| TC | HRGMv2_2847_8 | HRGMv2_2847_8_67 | 81594 | 82448 | - | 3.A.1.15.10 |
| TC | HRGMv2_2847_8 | HRGMv2_2847_8_68 | 82445 | 83158 | - | 3.A.1.15.4 |
| TC | HRGMv2_2847_8 | HRGMv2_2847_8_69 | 83171 | 84136 | - | 3.A.1.15.11 |
Gene ID: HRGMv2_2847_8_64
Type: CAZyme
Location: 76824 - 79205 (+)
Type: CAZyme
Location: 76824 - 79205 (+)
Gene ID: HRGMv2_2847_8_65
Type: CAZyme
Location: 79259 - 81040 (-)
Type: CAZyme
Location: 79259 - 81040 (-)
Gene ID: HRGMv2_2847_8_66
Type: TF
Location: 81027 - 81482 (-)
Type: TF
Location: 81027 - 81482 (-)
Gene ID: HRGMv2_2847_8_67
Type: TC
Location: 81594 - 82448 (-)
Type: TC
Location: 81594 - 82448 (-)
Gene ID: HRGMv2_2847_8_68
Type: TC
Location: 82445 - 83158 (-)
Type: TC
Location: 82445 - 83158 (-)
Gene ID: HRGMv2_2847_8_69
Type: TC
Location: 83171 - 84136 (-)
Type: TC
Location: 83171 - 84136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas ammoniilytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.