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Cluster: HRGMv2_2847_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2847_7 HRGMv2_2847_7_78 75915 77759 + 1.A.33.1.4
pfam HRGMv2_2847_7 HRGMv2_2847_7_79 77863 79035 + DnaJ | DnaJ_CXXCXGXG | DnaJ_C
NULL(UNKNOWN) HRGMv2_2847_7 HRGMv2_2847_7_80 79220 80638 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2847_7 HRGMv2_2847_7_81 80651 81337 + 3.A.1.122.2
pfam HRGMv2_2847_7 HRGMv2_2847_7_82 81334 82938 + Biotin_lipoyl_2
TC HRGMv2_2847_7 HRGMv2_2847_7_83 82952 84211 + 3.A.1.122.2
pfam HRGMv2_2847_7 HRGMv2_2847_7_84 84290 84895 + DUF4352 | DUF5067
TC HRGMv2_2847_7 HRGMv2_2847_7_85 85005 86279 + 2.A.49.9.2
CAZyme HRGMv2_2847_7 HRGMv2_2847_7_86 86450 89911 + PL1 | PL9_1
Gene ID: HRGMv2_2847_7_78
Type: TC
Location: 75915 - 77759 (+)
Gene ID: HRGMv2_2847_7_79
Type: pfam
Location: 77863 - 79035 (+)
Gene ID: HRGMv2_2847_7_80
Type:
Location: 79220 - 80638 (+)
Gene ID: HRGMv2_2847_7_81
Type: TC
Location: 80651 - 81337 (+)
Gene ID: HRGMv2_2847_7_82
Type: pfam
Location: 81334 - 82938 (+)
Gene ID: HRGMv2_2847_7_83
Type: TC
Location: 82952 - 84211 (+)
Gene ID: HRGMv2_2847_7_84
Type: pfam
Location: 84290 - 84895 (+)
Gene ID: HRGMv2_2847_7_85
Type: TC
Location: 85005 - 86279 (+)
Gene ID: HRGMv2_2847_7_86
Type: CAZyme
Location: 86450 - 89911 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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