Cluster: HRGMv2_2847_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2847
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2847_4 | HRGMv2_2847_4_97 | 98165 | 99505 | + | 3.B.1.1.5 |
| TC | HRGMv2_2847_4 | HRGMv2_2847_4_98 | 99533 | 99895 | + | 3.B.1.1.2 |
| TC | HRGMv2_2847_4 | HRGMv2_2847_4_99 | 99946 | 101355 | + | 3.B.1.1.6 |
| pfam | HRGMv2_2847_4 | HRGMv2_2847_4_100 | 101429 | 102376 | + | HTS |
| CAZyme | HRGMv2_2847_4 | HRGMv2_2847_4_101 | 102496 | 104343 | - | CBM22 | GH10 |
Gene ID: HRGMv2_2847_4_97
Type: TC
Location: 98165 - 99505 (+)
Type: TC
Location: 98165 - 99505 (+)
Gene ID: HRGMv2_2847_4_98
Type: TC
Location: 99533 - 99895 (+)
Type: TC
Location: 99533 - 99895 (+)
Gene ID: HRGMv2_2847_4_99
Type: TC
Location: 99946 - 101355 (+)
Type: TC
Location: 99946 - 101355 (+)
Gene ID: HRGMv2_2847_4_100
Type: pfam
Location: 101429 - 102376 (+)
Type: pfam
Location: 101429 - 102376 (+)
Gene ID: HRGMv2_2847_4_101
Type: CAZyme
Location: 102496 - 104343 (-)
Type: CAZyme
Location: 102496 - 104343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Porcipelethomonas
Species
Porcipelethomonas ammoniilytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.