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Cluster: HRGMv2_2847_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2847_4 HRGMv2_2847_4_73 70113 71609 - GH77
pfam HRGMv2_2847_4 HRGMv2_2847_4_74 71623 72459 - Exo_endo_phos
TC HRGMv2_2847_4 HRGMv2_2847_4_75 72469 74646 - 4.A.1.1.17
CAZyme HRGMv2_2847_4 HRGMv2_2847_4_76 74677 76938 - GT35
STP HRGMv2_2847_4 HRGMv2_2847_4_77 77114 78604 - Pyr_redox_2
STP HRGMv2_2847_4 HRGMv2_2847_4_78 78620 83188 - GATase_2
TC HRGMv2_2847_4 HRGMv2_2847_4_79 83807 84505 + 9.B.18.1.2
TC HRGMv2_2847_4 HRGMv2_2847_4_80 84549 85925 + 2.A.66.1.41
Gene ID: HRGMv2_2847_4_73
Type: CAZyme
Location: 70113 - 71609 (-)
Gene ID: HRGMv2_2847_4_74
Type: pfam
Location: 71623 - 72459 (-)
Gene ID: HRGMv2_2847_4_75
Type: TC
Location: 72469 - 74646 (-)
Gene ID: HRGMv2_2847_4_76
Type: CAZyme
Location: 74677 - 76938 (-)
Gene ID: HRGMv2_2847_4_77
Type: STP
Location: 77114 - 78604 (-)
Gene ID: HRGMv2_2847_4_78
Type: STP
Location: 78620 - 83188 (-)
Gene ID: HRGMv2_2847_4_79
Type: TC
Location: 83807 - 84505 (+)
Gene ID: HRGMv2_2847_4_80
Type: TC
Location: 84549 - 85925 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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